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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs189695 chr5:56225769 T/C C5orf35 chr5:56205103-56213010:+ 0.91 5.37 1.84E-6 Box Plot
ACC rs189859104 chr1:235334243 A/G RBM34 chr1:235294498-235324772:- 0.74 6.07 1.48E-7 Box Plot
ACC rs1902614 chr8:71656167 C/T XKR9 chr8:71581600-71702606:+ 0.72 6.84 8.94E-9 Box Plot
ACC rs190621453 chr7:97408233 C/A TECPR1 chr7:97843936-97881563:- 0.83 5.45 1.38E-6 Box Plot
ACC rs1908033 chr8:71922799 C/A XKR9 chr8:71581600-71702606:+ 0.62 5.92 2.57E-7 Box Plot
ACC rs1908034 chr8:71922554 T/C XKR9 chr8:71581600-71702606:+ 0.62 5.92 2.57E-7 Box Plot
ACC rs1908035 chr8:71922408 T/C XKR9 chr8:71581600-71702606:+ 0.62 5.92 2.57E-7 Box Plot
ACC rs1908036 chr8:71922324 C/T XKR9 chr8:71581600-71702606:+ 0.62 5.92 2.57E-7 Box Plot
ACC rs1909968 chr12:75811011 C/T GLIPR1L2 chr12:75784850-75826468:+ 0.74 5.16 3.9E-6 Box Plot
ACC rs193994 chr5:96258723 A/C ERAP2 chr5:96211643-96255420:+ 0.86 9.07 2.73E-12 Box Plot
ACC rs1959873 chr14:95490260 A/G GLRX5 chr14:95999840-96011061:+ 0.51 5.15 4.12E-6 Box Plot
ACC rs1964364 chr7:64957464 C/A INTS4L1 chr7:64601603-64694600:+ 0.7 5.42 1.55E-6 Box Plot
ACC rs1966269 chr7:76020550 T/A UPK3B chr7:76139745-76145838:+ 0.73 5.79 4.11E-7 Box Plot
ACC rs1967609 chr7:64510201 A/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs1967610 chr7:64510183 C/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot